BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029A07SP1|AL429000
(867 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig602 1708 0.0
>3x_Contig602
Length = 2648
Score = 1708 bits (859), Expect = 0.0
Identities = 863/867 (99%)
Strand = Plus / Minus
Query: 1 ggatcaatgacacattctggagtcttgtaatggtatgctgggaaawggawaatgtcatcg 60
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 1066 ggatcaatgacacattctggagtcttgtaatggtatgctgggaaatggataatgtcatcg 1007
Query: 61 tttgatggatttttattgcaaattaaggccaatgacccttttttaccacatctkaggaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1006 tttgatggatttttattgcaaattaaggccaatgacccttttttaccacatctgaggaca 947
Query: 121 caaatgttaccaggtttaatcaatgctgcwaatttcaataatattgtgctgcaatccgaa 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 946 caaatgttaccaggtttaatcaatgctgctaatttcaataatattgtgctgcaatccgaa 887
Query: 181 agttcagttggctctgtttcacccagcatcctagcgccttcttccgcatttggcgaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 agttcagttggctctgtttcacccagcatcctagcgccttcttccgcatttggcgaaaag 827
Query: 241 atgaaatggtatggtccgttgagcaacttcttaatcccttcgaggtgctcaacgttacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 atgaaatggtatggtccgttgagcaacttcttaatcccttcgaggtgctcaacgttacac 767
Query: 301 aaatctggtattggttcccatataaacgtttgacctgttttcagagttccctcaaatgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 aaatctggtattggttcccatataaacgtttgacctgttttcagagttccctcaaatgac 707
Query: 361 aactcttcggcaagcttatccagaatatcggccactctatcagcagaacatagcaaatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 aactcttcggcaagcttatccagaatatcggccactctatcagcagaacatagcaaatga 647
Query: 421 tagcatgaaactctttgtactgctttgacaccgaacgactcgcaccagtcagaaacatct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tagcatgaaactctttgtactgctttgacaccgaacgactcgcaccagtcagaaacatct 587
Query: 481 attcttttctttggcgctagatatttgaatgatctaaaatcattcggaccatatacgtta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 attcttttctttggcgctagatatttgaatgatctaaaatcattcggaccatatacgtta 527
Query: 541 taacctcttgtagttaatctttcattgtcatctcgaaacacacaacccgtgtcccaagat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 taacctcttgtagttaatctttcattgtcatctcgaaacacacaacccgtgtcccaagat 467
Query: 601 tcgatagtctccgtcagttgcttagggaaatccattccacgatcaacaatccatagcagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tcgatagtctccgtcagttgcttagggaaatccattccacgatcaacaatccatagcagt 407
Query: 661 tccttgcgcagagataggtcagtacagcatattgatgcgcctaacatggcatacgtccca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tccttgcgcagagataggtcagtacagcatattgatgcgcctaacatggcatacgtccca 347
Query: 721 cctccacctagtacgtcgtaatagtgcgatgacgccgtctcgatctcatcgatgataagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cctccacctagtacgtcgtaatagtgcgatgacgccgtctcgatctcatcgatgataagc 287
Query: 781 atcccattggtagtaagaagacccatattggcaatgactgcttaattccgtttacacctg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 atcccattggtagtaagaagacccatattggcaatgactgcttaattccgtttacacctg 227
Query: 841 aaaattatagtgatgggcggtaggtct 867
|||||||||||||||||||||||||||
Sbjct: 226 aaaattatagtgatgggcggtaggtct 200
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4926
Number of Sequences: 1807
Number of extensions: 4926
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 867
length of database: 10,358,551
effective HSP length: 16
effective length of query: 851
effective length of database: 10,329,639
effective search space: 8790522789
effective search space used: 8790522789
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)